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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: ABCGI_DICDI
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.57
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MENEEKREYL AKSRSNSRNF LNDSIESKNI FGVDKKSEPN LKQSIDGGLN FSTTSSYNPS  60
   61 NLPRTSVFVS ARNLSSTVGH GKNEKKILTD LNFFLKPGSM VLLLGSPGCG KTSLMNTLAL 120
  121 LTSNEKITGN LLFNGKTGDP NTHHRHVSYV VQDDFHMAPL TVRDTFKFSA DCQSGDKSEK 180
  181 ERIEIVDNVL DFLDLKHVQN TVVGDEFLRG ISGGQKKRVT IGVELVKESN LLLMDEPTNG 240
  241 LDSSISLEML TKIKNKVQQE KMSCLISLLQ PGLEITKLFD YLMIMNQGQM SYFGPMNQAI 300
  301 GYFEGLGFKF PKHHNPAEFF QEIVDEPELY CGIDDGSSDG GSGDSGSSSG GSNYNYNFKN 360
  361 KASSTMMMMN NNNKIIPPLK GSDEFAMAYR KSIIYKHILE YIDSHIPDEE ERSKFIDYST 420
  421 TLKPYSTGFG RQLSLNVKRG FKLFLGNKAS IRLRLLKNVI IGFILGTLYW KLDTTQADGS 480
  481 NRSGLLFFSL LTFVFGGFGS ISVFFDQRQV FYSERAWKYY NTITYFLSMI VTDLPMSIVE 540
  541 VLIFSNFVYW MTGLNKTWDR FIYFFLTCLV CDVMSLSIIR SVCSFTKTKY AASAISPAVV 600
  601 SPFILMCGYM KHSNEIPGWW IWLYWISPIH YGFEGLLLNE HSGLDYHCSP DELMPPSFLP 660
  661 TFNTSYPVGF EGNQVCPITK GEQILDSIGF HTEFYYRWVD LAIISAFTLL FWLITLVCMK 720
  721 FLVFRVYRKD PVGIKKSKPN KTTTLIKMNR NSTDSTTTNN SMNYFNNKHN KKQNDDSDSG 780
  781 EEMESVDVDV KSSGKANLRK DIPIGCYMQW KDLVYEVDVK KDGKNQRLRL LNGINGYVKP 840
  841 GMLVALMGPS GAGKSTLLDV LANRKTGGHT KGQILINGQE RTKYFTRTSA YVEQMDILTP 900
  901 VSTVREVILF SAKNRLPNSV PIQEKEEFVD NILETLNLLK IQHSLIGDVE SGLSLSQRKR 960
  961 VNMGIELASD PQLLFLDEPT SGLDSSAALK VMNLIKKIAS SGRSVICTIH QPSTTIFKKF1020
 1021 DHLLLLKRGG ETVYFGPTGT NSKIVLNYFA ERGLICDPFK NPADFILDVT EDIIEIIQPP1080
 1081 QTLPTSTSNE NNNNNNNNNN NNNNNNNNNN NNNNNNNNGN TSDTLNNNNK KNLESSLSSS1140
 1141 SISFDPVESF KESKENQKLL SIVENSIMPV GTPVAVYHGK YSSTIKTQFI ELLKRSWKGG1200
 1201 IRRVDTIRTR VGRSFVLGLV IGTLFLRLDK EQNDVFNRIS FLFFSLMFGG MAGLSIIPTV1260
 1261 STERGVFYRE QASGMYRVWI YYLTFVLSDL PFVIITSYAY VIPVYFLTGL SLSNHGWDFF1320
 1321 YHSFISVMLY LNFGLTSIAF ATSLPVEEMA FLLNGVLLSV TSLFAGFMIP PPSMPAAWKW1380
 1381 AFYLDFISYP LKAFLITEFK DMEFVCTDNK GAIPIPIPSQ NTTKFFCPIT HGTQVLDRID1440
 1441 YKISFQYWDI LIMASFTFAL LVGGYLSLKF IRYQNK

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle