YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|28829618, gi\|...
Protein type:	Globular with Signal Peptide
Type Confidence:	0.58
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MTKLVTVFGA TGQQGSSVVR ELLKNGNFKV RALTRDPSSE ASKSLKELGA EVVKSNDTDS  60
   61 KEAIQEVLKG SDAVFALTIA FAQNETDVGK KIADAAFGAG VKHFVFSGLP PCNKISNGRI 120
  121 IVPHFDQKYL VEEYVRELSE SNPSFISSFV YAPFYYQNFK SFVPKKNENG DGGYTISLPS 180
  181 NGKPMDMGDV DNIGAIVCEI LLNENKYSGV VVPFSGGALS GPEIANIFSK VSGKSVTFKF 240
  241 IPPSIFRTFG FPNANDLASM FEFYNEFGVF NDLDQSIASK ITKFTTFGEY LKNSNFKLD

Type	Start	End	Confidence
Signal Peptide	1	17	0.57
N-region	1	8
H-region	9	14
C-region	15	17
Cleavage Site	17	18
Non-Cytoplasmic	18	299	0.99