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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: PIP_ARATH
Protein type: Globular with Signal Peptide
Type Confidence: 0.92
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MNLILASFSL APCFCVRFFP SNHNNLNLLF PGQRKIQVSC GGKSEVLKSD TMEPHEAETF  60
   61 VNKRTLYAPI EPYSSGNLKV SDVHTLYWEQ SGKPDGHPVV FLHGGPGGGT APSNRRFFDP 120
  121 EFYRIVLFDQ RGAGKSTPHA CLEENTTWDL VNDIEKLREH LKIPEWLVFG GSWGSTLALA 180
  181 YSQSHPDKVT GLVLRGIFLL RKKEIDWFYE GGAAAIYPDA WEEFRDLIPE NERGSSLVDA 240
  241 YHKRLNSDDL EIQYAAARAW TKWEMMTAYL RPNLENVQKA EDDKFSLAFA RIENHYFVNK 300
  301 GFFPSDSHLL DNVDKIRHIK TTIVQGRYDV CCPMMSAWDL HKAWPEAELK IVYDAGHSAN 360
  361 EPGISAELVV ANEKMKALMG 

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle