YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|397533\|emb\|CA...
Protein type:	Globular with Signal Peptide
Type Confidence:	0.99
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MQKVFFTMLN SIKLGFIVLL TLFTSLNVQA AGGIALGATR VIYPSAAKQT SLAISNSDTQ  60
   61 ERYLVNSWIE NNAGQKEKTF IVTPPLFVSE PKSENTLRII YAGQPLPEDR ESLFWMNVKA 120
  121 IPSVDKSHIE GKNVLQLAIL SRIKLFVRPA NLPQTPEDAP TLLKFSRVGN HLKITNPSAY 180
  181 YLTLVNISVG AKKIDNVMIA PKSDMQIPLP TGAQGSVTFQ TVNDYGALTS ATTASLG

Type	Start	End	Confidence
Signal Peptide	1	30	0.99
N-region	1	21
H-region	22	27
C-region	28	30
Cleavage Site	30	31
Non-Cytoplasmic	31	237	0.99