YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|130497370, gi...
Protein type:	Globular with Signal Peptide
Type Confidence:	0.61
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MFTFMVFSTL ISSIFTEPGK LHWVCKSADA TVSYTYCDNM EIPISINVEP CITLKGTQGL  60
   61 LHIFYIPRRD MNQLYLNLYI SVNSMDLPKR KEIICKGSDD VYSFCRALKG ETVNTTVPFS 120
  121 FKGIRLSKGQ YRCVVEAIAG SAEEMIFCLN FTIIHNPRVN

Type	Start	End	Confidence
Signal Peptide	1	16	0.61
N-region	1	7
H-region	8	13
C-region	14	16
Cleavage Site	16	17
Non-Cytoplasmic	17	160	0.97