YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|21552717
Protein type:	Globular with Signal Peptide
Type Confidence:	0.98
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKLACLLLLV FIAWTADALV RIPLKKFRSI RRTMSDSGRA VEESRGNSQN TKYNLGVTNK  60
   61 FGPTPETLKN YLDAQYYGEI GLGTPVQTFT VVFDTGSSNL WVPSVHCSLT DIACLLHHKY 120
  121 NGAKSSTYVK NGTAFAIQYG SGSLSGYLSQ DVCSIGDIAV EKQIFGEAIK QPGVAFIAAK 180
  181 FDGILGMAYP RIAVDGVPPV FDMMSQKKFE KNVFSFYLNR NPDTQPGGEL LLGGTDPKFY 240
  241 TGDFHYVNIT RQAYWQIHMD GMSIGSQLSL CNGGCEAIVD TGTSLITGPA AEVKALQKAI 300
  301 GAIPLIQGEY MVDCKKVPSL PTISFNLGGQ TYTLTGEQYI LKESQAGREI CLSGFMALDI 360
  361 PPPAGPLWIL GDVFIGQYYT MFDRENNQVG FAKAI

Type	Start	End	Confidence
Signal Peptide	1	18	0.99
N-region	1	9
H-region	10	15
C-region	16	18
Cleavage Site	18	19
Non-Cytoplasmic	19	395	0.99