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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|3004962
Protein type: Globular with Signal Peptide
Type Confidence: 0.99
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MLRLWACLLL LGSIQIQAVP FYGDFMPHLT HPLPAHRNLF APLPFAPLAP LEPQDPLHAQ  60
   61 ASQRMASVWN GPAPLAPQLH SSHLLPLFSS GYDTEFVPLE HQQQPQGRQE TAATVPAQTP 120
  121 SGVEQKPFNV DTITTDVNSP NPAIFFQQSF PFFGNEFFNS FGGFGFGAAQ EPWWKGPNVC 180
  181 TEKEEDETVA SETEAEETVD TFGQERDGVT NVVRSPLFGQ FQFSVNSCAE KPNKHVCTKI 240
  241 VNQNGKKKTL TLTRQCCYGY GRPRNADFTT PCEKIDIKDV EATASDMGAK QFLESARTAG 300
  301 ELADMLGAGS GKKVTLFVPN DAAFMEYRGH HQQENNVEDA KAEASKPSIY KLHAVLGEVQ 360
  361 LEDVPNEKLL QTELPDQKIR INSYQLPAAL GLEPYRFAVN CVPIEKHDKL SEQALVHTLG 420
  421 GVLKPLTKNL MDIIRERADM SIMRTVLEKT NLSAMLEDDK PVTIFVPTDA AFDKLEPHLR 480
  481 RALKEGRGCA SNILKNHLLD LTFCSLATVP GAKTTAYNLL GEPLLLNRTH RAANQTGPTP 540
  541 IYINNLAKII DADIMGTNGV LHVIDTILPT ESALPMTSLM SQKNLTIFQR LLEASGYDDQ 600
  601 FDDLDNVTIF APTDKALQNT EWARMLKEQP ELLNHNLDLL EFLNYHVVKP MIKTCDLSEK 660
  661 SLPTVAGSSV RLNLYSTHAL FSDVMNRATV NCARLVHFDD ESCGSVLHQV DRALAPPKNN 720
  721 MLKLLEANPN YSKFLELVRK ANLTQLLSND SRSLTLLVPK NDIFEELNES GEGSKPADPM 780
  781 ALVKTHIVED VVCCAGIIPT NWPFVRSIES ISGQHLRITR DRRPKIENAG VTKCDVVATN 840
  841 GILHEINDII VPRPQRQQQQ RPQLIPPGAG YQPQGDFDVF F

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle