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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|31339069
Protein type: Transmembrane with Signal Peptide
Type Confidence: 0.99
Topology Confidence: 0.83
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MQTPLLSLAG ATTELCFLPA SVLASSLPGP SLCSGAFVGQ RCQDSNPCLS TPCKNAGTCH  60
   61 VVDHGGTVDY ACSCPLGFSG PLCLTPLDNA CLANPCRNGG TCDLLTLTEY KCRCPPGWSG 120
  121 KSCQQADPCA SNPCANGGQC LPFESSYICR CPPGFHGPTC RQDVNECSQN PGLCRHGGTC 180
  181 HNEIGSYRCA CRATHTGPHC ELPYVPCSPS PCQNGGTCRP TGDTTHECAC LPGFAGQNCE 240
  241 ENVDDCPGNN CKNGGACVDG VNTYNCRCPP EWTGQYCTED VDECQLMPNA CQNGGTCHNT 300
  301 HGGYNCVCVN GWTGEDCSEN IDDCASAACF QGATCHDRVA SFYCECPHGR TGLLCHLNDA 360
  361 CISNPCNEGS NCDTNPVNGK AICTCPSGYT GPACSQDVDE CALGANPCEH AGKCLNTLGS 420
  421 FECQCLQGYT GPRCEIDVNE CISNPCQNDA TCLDQIGEFQ CICMPGYEGV YCEINTDECA 480
  481 SSPCLHNGHC MDKINEFQCQ CPKGFNGHLC QYDVDECAST PCKNGAKCLD GPNTYTCVCT 540
  541 EGYTGTHCEV DIDECDPDPC HYGSCKDGVA TFTCLCQPGY TGHHCETNIN ECHSQPCRHG 600
  601 GTCQDRDNSY LCLCLKGTTG PNCEINLDDC ASNPCDSGTC LDKIDGYECA CEPGYTGSMC 660
  661 NVNIDECAGS PCHNGGTCED GIAGFTCRCP EGYHDPTCLS EVNECNSNPC IHGACRDGLN 720
  721 GYKCDCAPGW SGTNCDINNN ECESNPCVNG GTCKDMTSGY VCTCREGFSG PNCQTNINEC 780
  781 ASNPCLNQGT CIDDVAGYKC NCPLPYTGAT CEVVLAPCAT SPCKNSGVCK ESEDYESFSC 840
  841 VCPTGWQGQT CEVDINECVK SPCRHGASCQ NTNGSYRCLC QAGYTGRNCE SDIDDCRPNP 900
  901 CHNGGSCTDG INTAFCDCLP GFQGAFCEED INECASNPCQ NGANCTDCVD SYTCTCPVGF 960
  961 NGIHCENNTP DCTESSCFNG GTCVDGINSF TCLCPPGFTG SYCQYDVNEC DSRPCLHGGT1020
 1021 CQDSYGTYKC TCPQGYTGLN CQNLVRWCDS APCKNGGRCW QTNTQYHCEC RSGWTGVNCD1080
 1081 VLSVSCEVAA QKRGIDVTLL CQHGGLCVDE GDKHYCHCQA GYTGSYCEDE VDECSPNPCQ1140
 1141 NGATCTDYLG GFSCKCVAGY HGSNCSEEIN ECLSQPCQNG GTCIDLTNSY KCSCPRGTQG1200
 1201 VHCEINVDDC HPPLDPASRS PKCFNNGTCV DQVGGYTCTC PPGFVGERCE GDVNECLSNP1260
 1261 CDPRGTQNCV QRVNDFHCEC RAGHTGRRCE SVINGCRGKP CKNGGVCAVA SNTARGFICR1320
 1321 CPAGFEGATC ENDARTCGSL RCLNGGTCIS GPRSPTCLCL GSFTGPECQF PASSPCVGSN1380
 1381 PCYNQGTCEP TSENPFYRCL CPAKFNGLLC HILDYSFTGG AGRDIPPPQI EEACELPECQ1440
 1441 VDAGNKVCNL QCNNHACGWD GGDCSLNFND PWKNCTQSLQ CWKYFSDGHC DSQCNSAGCL1500
 1501 FDGFDCQLTE GQCNPLYDQY CKDHFSDGHC DQGCNSAECE WDGLDCAEHV PERLAAGTLV1560
 1561 LVVLLPPDQL RNNSFHFLRE LSHVLHTNVV FKRDAQGQQM IFPYYGHEEE LRKHPIKRST1620
 1621 VGWATSSLLP GTSGGRQRRE LDPMDIRGSI VYLEIDNRQC VQSSSQCFQS ATDVAAFLGA1680
 1681 LASLGSLNIP YKIEAVKSEP VEPPLPSQLH LMYVAAAAFV LLFFVGCGVL LSRKRRRQHG1740
 1741 QLWFPEGFKV SEASKKKRRE PLGEDSVGLK PLKNASDGAL MDDNQNEWGD EDLETKKFRF1800
 1801 EEPVVLPDLS DQTDHRQWTQ QHLDAADLRM SAMAPTPPQG EVDADCMDVN VRGPDGFTPL1860
 1861 MIASCSGGGL ETGNSEEEED APAVISDFIY QGASLHNQTD RTGETALHLA ARYSRSDAAK1920
 1921 RLLEASADAN IQDNMGRTPL HAAVSADAQG VFQILLRNRA TDLDARMHDG TTPLILAARL1980
 1981 AVEGMLEDLI NSHADVNAVD DLGKSALHWA AAVNNVDAAV VLLKNGANKD MQNNKEETPL2040
 2041 FLAAREGSYE TAKVLLDHFA NRDITDHMDR LPRDIAQERM HHDIVRLLDE YNLVRSPQLH2100
 2101 GTALGGTPTL SPTLCSPNGY LGNLKSATQG KKARKPSTKG LACGSKEAKD LKARRKKSQD2160
 2161 GKGCLLDSSS MLSPVDSLES PHGYLSDVAS PPLLPSPFQQ SPSMPLSHLP GMPDTHLGIS2220
 2221 HLNVAAKPEM AALAGGSRLA FEPPPPRLSH LPVASSASTV LSTNGTGAMN FTVGAPASLN2280
 2281 GQCEWLPRLQ NGMVPSQYNP LRPGVTPGTL STQAAGLQHS MMGPLHSSLS TNTLSPIIYQ2340
 2341 GLPNTRLATQ PHLVQTQQVQ PQNLQLQPQN LQPPSQPHLS VSSAANGHLG RSFLSGEPSQ2400
 2401 ADVQPLGPSS LPVHTILPQE SQALPTSLPS SMVPPMTTTQ FLTPPSQHSY SSSPVDNTPS2460
 2461 HQLQVPEHPF LTPSPESPDQ WSSSSPHSNI SDWSEGISSP PTTMPSQITH IPEAFK

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