YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	EMC4_XENLA
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.78
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MATPTNLVTN RGRRFKWAIE FGSGGSRGRG ERGGLQDSMY PVGYSDKQVP DTSVQESDHI  60
   61 LVEKRCWDIA LGPLKQIPMN LFIMYMAGNT ISIFPIMMVC MMAWRPIQAL LATPATFKLL 120
  121 ESSGQRFLQG LVYLIGNLLG LALGVYKCQS MGLLPTHASD WLAFIEPPER MEYTGGGFLL 180
  181

Type	Start	End	Confidence
Cytoplasmic	1	80	0.85
Transmembrane Helix	81	105	0.86
Non-Cytoplasmic	106	126	0.78
Transmembrane Helix	127	146	0.86
Cytoplasmic	147	180	0.78