YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|21326753
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.58
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSNHHMAHMG HDMNSSTTPT PDPHAHHHAM TTAGHIHDGG MMMMHMTFYF SYNNVPLLFS  60
   61 GLVINTAGEM AGRFVAIFLL AMFYEGLKIA RESLLRKSQV SIRYNSMPVP GPNGTVLMET 120
  121 HKTVGQQMLS FPHLFQTALD IVQVVVSYFL MLIFMTYNGY LCIAVAAGAG TGYFLFSWKK 180
  181 AVVVDITEHC H

Type	Start	End	Confidence
Cytoplasmic	1	44	0.76
Transmembrane Helix	45	64	0.64
Non-Cytoplasmic	65	69	0.51
Transmembrane Helix	70	87	0.78
Cytoplasmic	88	133	0.76
Transmembrane Helix	134	152	0.58
Non-Cytoplasmic	153	155	0.38
Transmembrane Helix	156	177	0.81
Cytoplasmic	178	191	0.60