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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|189514630, gi...
Protein type: Transmembrane with Signal Peptide
Type Confidence: 0.99
Topology Confidence: 0.82
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MRCAAMLLKG LILLMLLVQF SAEEGGKPKK GKKGKQVICP SQLSAEDLDR VPANSTSNIL  60
   61 NRLLMTYDSR IRPNFKGIPV EDKVNIFINS FGSIQETTMD YRVNIFLRQR WNDPRLRLPT 120
  121 DFKSDALTVD PKMFQCLWKP DLFFANEKNA NFHDVTQENI LLFIFRNGDV LISMRLSVTL 180
  181 SCPLALQLFP MDTQYCKMQL ESFGYTTKDL VFMWQSGDPV QMDEIALPQF DVKQEDIKYA 240
  241 NCTKFYPGTG YYTCVEVIFT LRRQVGFYMM GVYAPTLLIV VLSWLSFWIN PDASAARVPL 300
  301 GILSVLSLSS ECTSLASELP KVSYVKAIDI WMIACLLYGF ASLVEYAVVQ VMLNSPKRIE 360
  361 AEKIKMAEKE KAREKENKTP AKTNSANGTG GTPIHVSTLQ VVENRCKKVC TSKSDLRSND 420
  421 FSIVGSLPRD FELSNFDCYG KPIEVTDASG KPQNKNNKKP APPKPVIPSA AKRVDLYARA 480
  481 LFPFTFLFFN VIYWSVYL

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle