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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: NCSEA_DICDI
Protein type: Globular with Signal Peptide
Type Confidence: 0.81
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKRSIVFIYS LVILLLSVGF IDAFKISIEN HIKLSDDSSY QIGTGIYDIT GPGAETNMMG  60
   61 YAMPGQITGG IHFRQRARAF VFIDSEGNRA VYVSTDSCMI FQEVKIQVIQ DLQEIFGPTL 120
  121 YTHDNVLLSG THTHSGPAGF SEYALYGITA LGFYKKNFDT ICDGIVQAIV KAHKSVQPAR 180
  181 MLTQQGELWN SNINRSPYAY DNNPEEEKAM YDANVDKNMT VIRIEDMSGN PFAAISFFGV 240
  241 HCTSMNNTNH LISGDNKGYA SYLWEKHANG QSSLPGTGPF IAAFGQSNEG DVSPNTRGPT 300
  301 CRDGKPCDYK TSTCNGKVEE CWALGPGTDG DMFESTQIIG GNQFNKALEL FNNATIQVSG 360
  361 KIQYRHTWKP FTNVSVEAPY NSGVEGATTC RGAMGYSFAG GTTDGPGAFN FIQGDNSTTN 420
  421 PFWNFIGGII AKPTPQQTAC QAPKPILIDV GMVEPIPWVP DVMPLQIITL GQIVLVAVPG 480
  481 EFTTMSGRRL RNTVREIIGQ SIENPIVLIA GLANTYSGYI ATFEEFQVQR YEGASTVFGP 540
  541 HTLGAYQQEF ANLAQSIVDG SQADPGTFPR NMSGHTPFFL PPVIVDVAPK FDDFGDIYTD 600
  601 VSTTTPYSIN QTVTVIFYGA NLRNNFMTES SFLTVDQLQS NGQWTTILND GDWDTKLYWK 660
  661 MHDLGFSLIT VDWTISPITQ PGTYRITHSG YAKKNPFSDN LTFYQGISSN FNVQ

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle