YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	ATP6_PHOLL
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.74
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSASGEVSTA RDYIGHHLNN LQLDLRTFEL VDPNSGGSAT FWTLNIDSLF FSVVLGILFL  60
   61 YVFRKVAVNA TSGVPGKLQT AIELIMGFVD NSVRDMYHGK SKVIAPLALT VFVWVLLMNV 120
  121 MDLLPIDFLP YIGEHFFGLP ALRVVPTADV SVTLSMAIGV FVLILYYSIK MKGIGGFTKE 180
  181 LTLQPFNHPL FIPINLILEG VSLLSKPVSL GLRLFGNMYA GELIFILIAG LLPWWSQWLL 240
  241 SLPWAIFHIL IITLQAFIFM VLTIVYLSMA SEEH

Type	Start	End	Confidence
Non-Cytoplasmic	1	40	0.87
Transmembrane Helix	41	63	0.85
Cytoplasmic	64	102	0.91
Transmembrane Helix	103	126	0.86
Non-Cytoplasmic	127	146	0.86
Transmembrane Helix	147	169	0.90
Cytoplasmic	170	214	0.85
Transmembrane Helix	215	236	0.89
Non-Cytoplasmic	237	243	0.76
Transmembrane Helix	244	267	0.92
Cytoplasmic	268	274	0.74