YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|37526392, gi\|...
Protein type:	Globular with Signal Peptide
Type Confidence:	0.90
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKVTVFGIGY VGLVQAAVLA EVGHNVLCID IDANKVENLK NGQIPIFEPG LAPLVKKNYE  60
   61 EGRLNFSTDA KAGVAHGKLQ FIAVGTPPDE DGSADLKYVT AVARTIAEYM DSYKVIIDKS 120
  121 TVPVGTADKV NAVVNETLRQ RNIDIPFDVV SNPEFLKEGA AVADCMRPER IIIGCDNERV 180
  181 VDLMYELYEP FNRNHDRMIV MDIRSAELTK YAANCMLATK ISFMNEISNL AEMLGADIEH 240
  241 VRQGIGSDSR IGYHFIYPGC GYGGSCFPKD VQALIRTAEQ IGYQPKILRA VEQVNELQKH 300
  301 KLPSFVTRHF GEDLSGKTFS VWGLSFKPNT DDMREASSRV LMEALWQAGA KIQAYDPEAM 360
  361 QEAQRIYGQR DDLLLMGTKE AALKGADALI ICTEWQSFRA PDFDVIKESL KTPVIFDGRN 420
  421 LYDPERLQSR GFTYYGIGRG ASINPVI

Type	Start	End	Confidence
Signal Peptide	1	20	0.88
N-region	1	11
H-region	12	17
C-region	18	20
Cleavage Site	20	21
Non-Cytoplasmic	21	447	0.99