YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|36787309, gi\|...
Protein type:	Globular with Signal Peptide
Type Confidence:	0.98
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKRKHLFLSA LAISIGLSAI SVPTISNAAL PAAIAGQTLP SLAPMLEKVL PAVVSVHVSG  60
   61 TQVQQEQSIP EEFRFFFGPN LPMGRESTRP FQGLGSGVII DAAKGYILTN NHVIENADKI 120
  121 RVQLNDGREY EAKLLGRDPQ TDIALLQLKD AKNLTAITMA DSDKLRVGDF AVAVGNPFGL 180
  181 GQTATSGIIS ALGRSGLNLE GLENFIQTDA SINRGNSGGA LVNLNGELIG INTAILAPGG 240
  241 GNIGIGFAIP SNMAKTLSEQ LIAHGEVKRG ILGIKGTEMN SDIAKAFNID AQRGAFVSEV 300
  301 LPKSAAAKAG IKSGDILISV DGKKISSFAE LKAKIGTTIP GKEIKIGLLR KGKPMEVSVT 360
  361 LENSEGQTTK AGNLTLALQG ATLSNGEVKG TYGVKIDSVA QNSPAALSGL QKNDLIVGIN 420
  421 NERIQNINEL RKVIDSKPPV IALNILRGEE SIYLLLRN

Type	Start	End	Confidence
Signal Peptide	1	28	0.96
N-region	1	19
H-region	20	25
C-region	26	28
Cleavage Site	28	29
Non-Cytoplasmic	29	458	0.99