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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|37528712, gi|...
Protein type: Transmembrane with Signal Peptide
Type Confidence: 0.99
Topology Confidence: 0.86
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MDSQRNLLLI ALLFVSFLVW QAWEADKNPQ PTTVQATQQT DMPSSENQAV PGSGKGKLIT  60
   61 VKTDVLSLTI NTRGGDIEEA DLLAYPDTLG SNQPFKLLET TPAFTYQAQS GLTGKDGPDN 120
  121 PMNSERPLYT AAQDSYVLAD GQDELRIPMN FVTKNGIVYV KTFVLKRGEY AISVDYRIHN 180
  181 TTEKPLQMTF FGQLKQSVEL PKHRDTGSSN FALHTYRGAA YSSDDTKYKK YSFSDIEGES 240
  241 LSVTTKGGWI AMLQQYFATA WVPVANETST FYTVALGKEM AAIGYKSAPI SVAANSEKTV 300
  301 SSTLWIGPEI QDEMAAVAPH LDLSVDYGWL WFISQPLFKL LKFLHGFIGN WGFSIIVITF 360
  361 IVRGIMYPLT KAQYTSMAKM RLLQPKLAAM RERIGDDKQR MSQEMMALYK AEKVNPLGGC 420
  421 LPLLIQMPIF LALYYMLMGS VELRHAPFAG WIHDLSAQDP YYILPLLMGV TMFIIQKMSP 480
  481 TTITDPMQQK IMTYMPVIFT IFFLWFPSGL VLYYIVSNLV TIIQQQLIYR GLEKRGLHSR 540
  541 EKKPAK

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle