YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|22136490, gi|...
Protein type: Transmembrane
Type Confidence: 0.97
Topology Confidence: 0.50
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MVGMIRGGMG DQNWSRLVFW LILFSGLLVI TLEENPEKDE IFLSQFMAPS TGQVNEHMEE  60
   61 TSWAQRCWQD SDCVKEAVAE FNLCFPGSKD SRELFGLNHT NLKQTLLDCI QEKGKLNGHN 120
  121 PKYLELLSSM LDIPRRNLAT KPGSSPSPSP SRPPKRSRGP PRPPTRPKSP PPRKSSFPPS 180
  181 RSPPPPPAKK NASKNSTSAP VSPAKKKEDH EKTIIIAVVV TAVSTFLLAA LFFLCCSRVC 240
  241 GNGSGGRKND ERPLLSLSSS DYSVGSSINY GGSVKGDKQG HQSFNIYSNQ GKMSSFDGSN 300
  301 SDTSDSLEER LSHEGLRNNS ITNHGLPPLK PPPGRTASVL SGKSFSGKVE PLPPEPPKFL 360
  361 KVSSKKASAP PPPVPAPQMP SSAGPPRPPP PAPPPGSGGP KPPPPPGPKG PRPPPPMSLG 420
  421 PKAPRPPSGP ADALDDDAPK TKLKPFFWDK VQANPEHSMV WNDIRSGSFQ FNEEMIESLF 480
  481 GYAAADKNKN DKKGSSGQAA LPQFVQILEP KKGQNLSILL RALNATTEEV CDALREGNEL 540
  541 PVEFIQTLLK MAPTPEEELK LRLYCGEIAQ LGSAERFLKA VVDIPFAFKR LEALLFMCTL 600
  601 HEEMAFVKES FQKLEVACKE LRGSRLFLKL LEAVLKTGNR MNDGTFRGGA QAFKLDTLLK 660
  661 LADVKGTDGK TTLLHFVVQE IIRTEGVRAA RTIRESQSFS SVKTEDLLVE ETSEESEENY 720
  721 RNLGLEKVSG LSSELEHVKK SANIDADGLT GTVLKMGHAL SKARDFVNSE MKSSGEGSGF 780
  781 REALEDFIQN AEGSIMSILE EEKRIMALVK STGDYFHGKA GKDEGLRLFV IVRDFLIILD 840
  841 KSCKEVREAR GRPVRMARKQ GSTASASSET PRQTPSLDPR QKLFPAITER RVDQSSSDSD 900
  901 

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle