YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|189402617, gi...
Protein type:	Globular with Signal Peptide
Type Confidence:	0.99
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKALTSLLLP VILLTGCSSS PTISPGGVNT PPPDINAWLK PRSEKPDSLS ETRWKMLTDA  60
   61 GKTLGFRGGK AQRSWELIQA LNARESTLNA LYDFRPLISP EGWLPPVIDE AQDVAHITPD 120
  121 QIRTSSRVWT IIRPERFVSN PPGWRDWLLR GLSTTATPGT EGSVVPEDSV QRKVWETALR 180
  181 QGWQEGRQNA DLTLEANQKT LTRDYRGMML YSLLWRQGMI TRPDVSDQMQ TVTGDGKKLV 240
  241 TGDRVRRLKN HAEFNLQKSH WRPLIGTEGG SR

Type	Start	End	Confidence
Signal Peptide	1	19	0.99
N-region	1	10
H-region	11	16
C-region	17	19
Cleavage Site	19	20
Non-Cytoplasmic	20	272	0.99