YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|40804950
Protein type:	Globular with Signal Peptide
Type Confidence:	0.67
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MRLTLLGTGG AAQVPVYNCA CPACRAAQLD PSRRRRACSA LVDCGGQRWL LDSGLPDLCE  60
   61 RFAPGSFSGI LQTHYHADHA QGLLQLRWGT GLHIPVLGPD DAEGLADLYK HPGILDFSEP 120
  121 FAAFEQRMLG TLRVTALPLV HSKPTFGYLL EGHSRCIAYL TDTVGLPDST RELLQDTALD 180
  181 VLVLDCSTPP RDTPPRNHND LTRALQSIEE LQPAQAVLTH IGHELDAWFM QASRELPDNV 240
  241 CLAYDGMTL

Type	Start	End	Confidence
Signal Peptide	1	22	0.64
N-region	1	13
H-region	14	19
C-region	20	22
Cleavage Site	22	23
Non-Cytoplasmic	23	249	0.99