YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|49082006
Protein type:	Globular with Signal Peptide
Type Confidence:	0.99
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MNRLMIVSLL GIATALGGCV NPPPKPNDPY YAPVLPRTPL PAAQNNGAIY QAGFEQNLYD  60
   61 DRKAFRVGDI ITITLNEKTQ ASKKANSDIQ KDSKTKMGLT SLFGSGMTTN NPIGGGDLSL 120
  121 SAEYGGSRDA KGDSQAGQSN SLTGSITVTV AEVLPNGILS VRGEKWMTLN TGNELVRIAG 180
  181 LVRADDIATD NTVSSTRVAD ARITYSGTGA FADASQPGWL DRFFLSPLWP FG

Type	Start	End	Confidence
Signal Peptide	1	17	0.98
N-region	1	8
H-region	9	14
C-region	15	17
Cleavage Site	17	18
Non-Cytoplasmic	18	232	0.99