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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|41351074, gi|...
Protein type: Transmembrane
Type Confidence: 0.91
Topology Confidence: 0.55
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 LMMMMLGVFI SAALFLGTAQ GASLGAVLTE GGMVQGKSHS VGLLRYMDVF KGIPFAAPPG  60
   61 RLQKPVPHPG WEGVLKATEY SKRCIQLNLL QTDTMGSEDC LYLNIWVPQG KTVSYNLPVM 120
  121 VFIYGGGFLL GGGQGANFLD NYLYDGEEIA DRGNVIVVTF NYRVGSMGFL STGDADAPGN 180
  181 YGLWDQHAAI SWVHRNIKAF GGNPDNITIF GESAGSTSVN FQIISPKNKG LIRRAISQSG 240
  241 VALCPWAINR NPRKFAEEIA KKVGCPTDSG MVACLRRTDP KAVTLAGKVR LATSATEPIV 300
  301 HNLYLSPVID GDFIPDEPDT LFGNAADIDY IAGVNDMDGH IFATLDIPSI NNALATTTEE 360
  361 EVQALATALS KDRGQDAGIA TFQEYTVNWG SKPNKEDIKK TVVEMETDYI FLVPTQTALY 420
  421 LHSDNAKSAR TYSYLFSESS RIPIFPLWMG ADHADELQYV FGKPFTTPLG YFPRHRDVSK 480
  481 YMIAYWTNFA QTGNPNTGES KVPVTWPEFS NPGHQYLDIN NKINTNSVKK MLRTRLVYYW 540
  541 TTVFASYPTV RN

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle