YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|49902823
Protein type:	Transmembrane
Type Confidence:	0.77
Topology Confidence:	0.72
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 QTTVKMKLYL ILAFVAFTGC QANLFYADEP KPQLEQLTDA FWSYVSKATQ TAEETVKMIR  60
   61 ESQLGQEVNE RLTQSADMAS EYAVTLKKQV DPLTEELMNK ITKETEVLRE RLGQDLINVR 120
  121 EKLEPYADNM KSQIQQRVEE LRAAMAPYAD SLDSETLKAT LLQKSEELRG NLEQSVKELQ 180
  181 AQLEPYTAEL KEKVDQHLQE FQKTVSPLAE DLQVQIRERA QIVQQSLTPY AEDLKEKLDP 240
  241 YAQNLKDQLI SLYDSFTKRY

Type	Start	End	Confidence
Cytoplasmic	1	7	0.72
Transmembrane Helix	8	27	0.74
Non-Cytoplasmic	28	260	0.99