YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|55725645
Protein type:	Globular with Signal Peptide
Type Confidence:	0.44
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAVLAPLIAL VYSVPRLSRW LAQPYYLLSA LLSAAFLLVR KLPPLCHGLP TQREDGNPCD  60
   61 FDWREVEILM FLSAIVMMKN RRSITVEQHI GNIFMFSKVA NAILFFRLDI RMGLLYITLC 120
  121 IVFLMTCEPP LYMGPEYIKY FNDKTIDEEL ERDKKVTWIV EFFANWSNDC QSFAPIYADL 180
  181 SLKYNCTGLN FGKVDVGRYT DVSMRYKVST SPLTKQLPTL ILFQGGKEVM RRPQIDKKGR 240
  241 AVSWTFSEEN VIREFNLNEL YQRAKKPSKA GDSIPEEQPV ASAPTTVSDG ENKKDK

Type	Start	End	Confidence
Signal Peptide	1	48	0.41
N-region	1	39
H-region	40	45
C-region	46	48
Cleavage Site	48	49
Non-Cytoplasmic	49	296	0.74