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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|55728677
Protein type: Transmembrane
Type Confidence: 0.89
Topology Confidence: 0.82
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MQAHELFRYF RMPELVDFRQ YVRTLPTNTL MGFGAFAALT TFWYATRPKP LKPPCDLSMQ  60
   61 SVEVAGSGGA RRSALLDSDE PLVYFYDDVT TLYEGFQRGI QVSNNGPCLG SRKPDQPYEW 120
  121 LSYKQVAELS ECIGSALIQK GFKTAPDQFI GIFAQNRPEW VIIEQGCFAY SMVVVPLYDT 180
  181 LGNEAITYIV NKAELSLVFV DKPEKAILLL EGVENKLIPG LKIIVLMDAY GSELVGRGQK 240
  241 CGGEVTSMKA MEDLGRANRR KPKPPAPEDL AVICFTSGTT GNPKGAMVTH RNIVSDCSAF 300
  301 VKATENTVNP CPDDTLISFL PLAHMFERVV ECVMLCHGAK IGFFQGDIRL LMDDLKVLQP 360
  361 TIFPVVPRLL NRMFDRIFGQ ANTTLKRWLL DFASKRKEAE LRGGIIRNNS LWDRLIFHKV 420
  421 QSSLGGRVRL MVTGAAPVSA TVLTFLRAAL GCQFYEGYGQ TECTAGCCLT MPGDWTAGHV 480
  481 GAPMPCNLIK LVDVEEMNYM PAEGEGEVCV KGPNVFQGYL KDPAKTAEAL DKDGWLHTGD 540
  541 IGKWLPNGTL KIIDRKKHIF KLAQGEYIAP EKIENIYVRS EPVAQVFVHG ESLQAFLIAI 600
  601 VVPDVETLCS WARKRGFEGS FEELCRNKDV KKAILEDMVR LGKDSGLKPF EQVKGITLHP 660
  661 ELFSIDNGLL TPTMKAKRPE LRNYFRSQID ELYSTIKV

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle