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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|55729221
Protein type: Globular with Signal Peptide
Type Confidence: 0.97
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MGAYARASGV CARGCLDAAG PWTMSRALRP PLPPLCFFLL LLLAAPGARA GGYETCPTVQ  60
   61 PNMLNVHLVP HTHDDVGWLK TVDQYFYGIK NDIQHAGVQY ILDSVISALL ADPTRRFIYV 120
  121 EIAFFSRWWH QQTNATQEVV RDLVRQGRLE FANGGWVMND EAATHYGAIV DQMTLGLHFL 180
  181 EDTFGNDGRP RVAWHIDPFG HSREQASLFA QMGFDGFFFG RLDYQDKWVR MQKLEMEQVW 240
  241 RASASLKPPT ADLFTGVLPN GYNPPRNLCW DVLCDDQPVV EDPHSPEYNA KELVDYFLNV 300
  301 ATAQGRYYRT NHIVMTMGSD FQYENANMWF KNLDKLIRLV NAQQAKGSGV HVLYSTPACY 360
  361 LWELNKANLT WSVKHDDFFP YADGPHQFWT GYFSSRPALK RYERLSYNFL QVCNQLEALV 420
  421 GLAANVGPYG SGDSAPLNEA MAVLQHHDAI SGTSRQHVAN DYARQLAAGW GPCEVLLSNA 480
  481 LARLRGFKDH FIFCRQLNIS ICPLTQTAAR FQVIVYNPLG RKVNWMVRLP VSEGVFVVKD 540
  541 PNGRTVPSDV VIFPSSDSQA HPPELLFSAS LPALGFSTYS VAQVPRWKPQ AHAPQPIPRR 600
  601 SWSPALTIEN EHIRATFDPD TGLLMEIMNM NQQLLLPVRQ TFFWYNASIG DNESDQASGA 660
  661 YIFRPNQQKP LPVSRWAQIH LVKTPLVQEV HQNFSAWCSQ VVRLYPGQRH LELEWSVGPI 720
  721 PVGDTWGKEV ISRFDTPLET KGRFYTDSNG REILERRRDY RPTWKLNQTE PVAGNYYPVN 780
  781 TRIYITDGNM QLTVLTDRSQ GGSSLRDGSL ELMVHRRLLK DDGRGVSEPL MENGSGAWVR 840
  841 GRHLVLLDTA QAAAAGHRLL AEQEVLAPQV VLAPDGGAAY NLGAPPRTQF SGLRRDLPPS 900
  901 VHLLTLASWG PEMVLLRLEH QFAVGEDSGR NLSAPVTLNL RDLFSTFTIT RLQETTLVAN 960
  961 QLREAASRLK WTTNTGPTPH QTPYQLDPAN ITLEPMEIRT FLASVQWKEV DG

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle