YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|55730891\|emb\|...
Protein type:	Transmembrane
Type Confidence:	0.88
Topology Confidence:	0.85
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MGGLWRPGWR RVAFCGWRWI HPGSPTRAAE RVEPFLRPEC SGTGGAGRGL RWLGTWKRCS  60
   61 LGARHPALQP PRRHKNSNPF TRAQKEEWRR RNKTTLTYVA AVAVGMLGAS YAAVPLYRLY 120
  121 CQTTGLGGSA VAGHASDKIE NMVPVKDRII KISFNADVHA SLQWNFRPQQ TEIYVVPGET 180
  181 ALAFYRAKNP TDKPVIGIST YNIVPFEAGQ YFNKIQQCFC FEEQRLNPQE EVDMPVFFYI 240
  241 DPEFAEDPRM IKVDLITLSY TFFEAKEGHK LPVPGYNSSQ QLSLPSKL

Type	Start	End	Confidence
Cytoplasmic	1	94	0.86
Transmembrane Helix	95	114	0.85
Non-Cytoplasmic	115	288	0.96