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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|55731394
Protein type: Globular with Signal Peptide
Type Confidence: 0.89
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAAVTAVAAR RRRSWASLIL AFLGVCLGIT LAVDRSNFKT CEESSFCKRQ RSIRPGLSPY  60
   61 RALLDSLQLG PDSLTVHLIH EVTKVLLVLE LQGLQKNMTR FRIDELEARR PRYRVPDVLV 120
  121 ADPPVARLSV SGRDDNSVEL TMAEGPYKII LTAQPFRLDL LEDRSLLLSV NARGLLEFEH 180
  181 QRAPRVSFSD KVSLTLGSIW DKIKNLFSRQ GSKDPAEGDG AQPEETPGDG NKPEETQGKA 240
  241 EKDEPGAWEE TFKTHSDSKP YGPMSVGLDF SLPGMEHVYG IPEHADNLRL KVTEGGEPYR 300
  301 LYNLDVFQYE LYNPMALYGS VPVLLAHNPH RDLGIFWLNA AETWVDISSN TAGKTLFGKM 360
  361 MDYLQGSGET PQTDVRWMSE TGIIDVFLLL GPSISDVFRQ YASLTGTQAL PPLFSLGYHQ 420
  421 SRWNYRDEAD VLEVDQGFDD HNLPCDVIWL DIEHADGKRY FTWDPSRFPQ PRTMLERLAS 480
  481 KRRKLVAIVD PHIKVDSGYR VHEELRNLGL YVKTRDGSDY EGWCWPGSAG YPDFTNPTMR 540
  541 AWWANMFSYD NYEGSAPNLF VWNDMNEPSV FNGPEVTMLK DAQHYGGWEH RDVHNIYGLY 600
  601 VHMATADGLR QRSGGMERPF VLARAFFAGS QRFGAVWTGD NTAEWDHLKI SIPMCLSLGL 660
  661 VGLSFCGADV GGFFKNPEPE LLVRWYQMGA YQPFFRAHAH LDTGRREPWL LPSQHNDIIR 720
  721 DALGQRYSLL PFWYTLLYQA HREGIPVMRP LWVQYPQDVT TFNIDDQYLL GDALLVHPVS 780
  781 DPGAHGVQVY LPGQGEVWYD IQSYQKHHGP QTLYLPVTLS SIPVFQRGGT VVPRWMRVRR 840
  841 SSECMKDDPI TLFVALSPQG TAQGELFLDD GHTFNYQTRQ EFLLRRFSFS GNTLVSSSAD 900
  901 PAGHFETPIW IERVVIIGAG KPAAVVLQTK GSPESRLSFQ HDPETSVLVL RKPGVNVASD 960
  961 WSIHLR

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle