YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	NDUB8_PONPY
Protein type:	Transmembrane
Type Confidence:	0.97
Topology Confidence:	0.85
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAVARAGVLG VQWLQRASWN VMPLGARTAS HMTKDMFPGP YPRTPEERAA AAKKYNMRVE  60
   61 DYEPYPDDGM GYGDYPKLPD RSQHERDPWY SWDQPDLRLN WGEPMHWHLD MFNRNRVDTS 120
  121 PILVSWNVMC MQLFGFLAFM IFMCWVGEVY PVYQPVGPKQ YPYNNLYLER GGDPSKEPER 180
  181 VVHYEI

Type	Start	End	Confidence
Cytoplasmic	1	122	0.91
Transmembrane Helix	123	146	0.85
Non-Cytoplasmic	147	186	0.91