YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|22476915
Protein type:	Transmembrane
Type Confidence:	0.85
Topology Confidence:	0.47
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MVKLGNNFAE KGTKQPLLED GFDTIPLMTP LDVNQLQFPP PDKVVVKTKT EYEPDRKKGK  60
   61 ARPPKIAEFT VSITEGVTER FKVSVLVLFA LAFLTCVVFL VVYKVYKYDR ACPDGFVLKN 120
  121 TQCIPEGLES YYTEQDSSAR EKFYTVINHY NVAKQSITRS VSPWMSVLSE EKLSEQETEA 180
  181 AEKSASSLEY MPME

Type	Start	End	Confidence
Cytoplasmic	1	82	0.47
Transmembrane Helix	83	103	0.79
Non-Cytoplasmic	104	194	0.61