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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|50287577, gi|...
Protein type: Globular with Signal Peptide
Type Confidence: 0.88
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MNRNKRVNVK PLSSLFLISY SDVRCDVEHL QKYKIHLYID IPTIDYYTDE LTETKLSKLN  60
   61 KKLKLSKLKH DIWRAFYNGD EQFWDRLKES NHQVKVTVDI SSSGSLRYVQ TIKFLLETIY 120
  121 NSLRELEYVQ LQFHLDSTLT SLKWFKTFLD PELMNAGIIK FNTIKHTPQQ SDNTKTPFKE 180
  181 YYMRLNNKFM DSERYFDKKV METIVIVTNQ TGVKALLTLL SDRPLNSYIS EESMKALQHM 240
  241 SASATRNRSY SATVPNHSYE TDFISHTPLK RVSSSILNFQ NESLPLSHEK EARVKSPISF 300
  301 ATSPTLTNSR SFTPIDFPGA ESYNSRAMSP DDLAMADALS DEFDEDEDNY DDEEFEEDDD 360
  361 NDDDDNDPDE GLSFFAPNIL SRSGSGFNLS SRAQNNINNK LKLPGTSKGR FRSLSLMDPA 420
  421 LNRPFMQKGL QMTPANTGLT VKDNRNELRC ASPLASTVTK FETNSNNNNE DTHDDDNNDL 480
  481 HTKFTNIYIH DGDFDEVVLD DSTQQRILHN KKKLMEIHGE DTGTRISNTP NSLIPPEFYS 540
  541 RLSSPSTSAS SSNTSLTQLN TLVTPQFTKW LNNANLLHSQ GNDKQSQIKG GANLFEQKLV 600
  601 KKSMEDLRNE PAKNFINGLI NGDIDSTEKN AYALNFRNTA NYSQHHYEAL DDEDRMMSGV 660
  661 TEDHDNTRQS SDLTFESSTT SESEDETATT ASVATIKPEM PSAQLFGLSN SHNSRLSQTS 720
  721 KTSLDQIRPS FSFQLYDDLE NIDNQVNEQI QQNPDSEPPK AYKKAVSIDL YGDEDPDNND 780
  781 TWLLGWNNK

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle