YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	TVP18_CANGA
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.49
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MALGITQFIN IAGLLKDLKS FNFSVYGKWF GYINIFLCIA LGIANLFHVS AVIAFGIVGI  60
   61 VQGLIILFIE IPFLLKICPL SDRFIEFIKR FETNGYRCIF YTLMAIVQYC SLAVMTTSLL 120
  121 VLGITLTISA VSYGIAFTKH QEFANTNIIK NPTDEDFPHD AVVREML

Type	Start	End	Confidence
Cytoplasmic	1	24	0.96
Transmembrane Helix	25	47	0.84
Non-Cytoplasmic	48	52	0.62
Transmembrane Helix	53	75	0.88
Cytoplasmic	76	97	0.81
Transmembrane Helix	98	131	0.77
Non-Cytoplasmic	132	167	0.49