YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|49640987
Protein type:	Transmembrane
Type Confidence:	0.85
Topology Confidence:	0.59
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MLFTQILRQS AEQKNGNVDS PNVSSKIKST PKYVQNVPTK SNVAVNLVVN SLFALGLYCL  60
   61 YKDYTITKQR NESTGTVKII DQPSNKVSSK EPSEIQNAST FPLVLHSLTY RDLSALTVTM 120
  121 GFLGYITEAA RQSFGKKSLV YRISLFSLVL FPTSSYFLYQ SRYDKTKGQT TLV

Type	Start	End	Confidence
Cytoplasmic	1	138	0.59
Transmembrane Helix	139	159	0.77
Non-Cytoplasmic	160	173	0.77