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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|49643585
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.78
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MASSDDDDTR NTSTSQVVTS LVFNIVVFAV FFISFILLRL KIKRIYQPKS SFDLINDEKK  60
   61 PQPLPSGIWQ WIVPLLKKSD NFIIQQAGLD GYFFIRYLFI ISAYCGFSML YMFPVLLPIN 120
  121 AVNGVAKKGF DMLAYSNVTE KGRYYGHVFC GWIFYWGFLF VIYRELTLYN SLRHSILASP 180
  181 RYAKKLSSRT VLFQSVPDQY LSETEFAKLF EHTKNIWIAR SAKQLSKLVK ERDALALKLE 240
  241 AAETSYLKMA VKAISKEKKK KGGADPSKIA NDITQYVPEK KRPSHRLKPV IGKKVDTINY 300
  301 AKEKLPELNA KIQELQNKHM EEKPMNSVFV EFNTQYDAQK AVQMVSHHSP LSLTPAYVGI 360
  361 SPTDVQWFNL RMFWLERLVR KFGSIAAIVA LVILWAFPVA FVGMVSNITY LTNKLPWLKF 420
  421 IYNMPDQLLG IITSLAPTIA LAVLMMLLPI FIRKMALIAG APSYQHVEYF TQQAYFAFQV 480
  481 IQVFLVTTLA SSATSTVTAI VEEPTSAMNL LAENLPKSSN FYVGYIILQG LSISSGALLQ 540
  541 IVPLILFFVL GMFLDSTARK KYARFTSLSS MAWGTTFPVY TNLAVITFSY AIISPLILLF 600
  601 ACVAFFLLYV AYLYNLTYVF QESPDSRGIH YPRALFQTMV GLYLGQICLL GLFVVGKGWG 660
  661 PIVLQAICLG VTVFVHLNFN SAFDHLMAFE PVDTMKALDG KSNTPSYIRD FVEPEKDEIK 720
  721 ELPPFQIKKY HPRSSSQFDQ RTTSILSDNT YEIQTGVFDT DNENTLNTVP LLADGDMTPV 780
  781 PPAPFWKRFL LPHIYYSYKA VKTRLPEIYN LPDPTEITDE KEIKHAYDFP TVSAKCPFLW 840
  841 IPRDPYGFST VQIADLAGVV EISDEGARFT ESGSIEWETA PPSYNDSQMQ VVSNPFDEQD 900
  901 EDNLQREE

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle