YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	ROT1_KLULA
Protein type:	Globular with Signal Peptide
Type Confidence:	0.80
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MRVLIPLSLF AVAVSGQNSD LEGTWSSKSN QVFTGPGFYD PIEELLIEPA LPGISYSFTA  60
   61 DGYFEEAMYQ VSGNPQDPKC PVAVLIFQHG TYEVKDDGQL VLTPIEVDGR QLLSQPCDDE 120
  121 GVSTYSRYYQ AESFKSYLVQ LDTYYGKQSL QLYGSDGAPL QPLFLAYKPP VMLPTITLNP 180
  181 TASDDAQPTS NAKRDLISHV RRSIENRHKT NAVKKTAPNI EKYWWGSLAL IGVGSIAFLL 240
  241 S

Type	Start	End	Confidence
Signal Peptide	1	16	0.97
N-region	1	7
H-region	8	13
C-region	14	16
Cleavage Site	16	17
Non-Cytoplasmic	17	241	0.96