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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: K2C5_RAT
Protein type: Globular with Signal Peptide
Type Confidence: 0.35
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSRQSSVSFR SGGSRSFSAA SAITPSVSRT TFSSVSRSGG GGGRVSLGGA YGAGGYGSRS  60
   61 LYNVGGSKRI SFSSGGGSFR NQFGAGAGGG YGFGGGAGSG FGFGGGAGSG FGFGGGAGFG 120
  121 GGYGGAGFPV CPPGGIQEVT VNQNLLTPLN LQIDPTIQRV RTEEREQIKT LNNKFASFID 180
  181 KVRFLEQQNK VLDTKWTLLQ EQGTKTIKQN LDPLFEQYIN NLRRQLDGVM GERGRLDSEL 240
  241 RNMQDLVEDY KNKYEDEINK RTTAENEFVM LKKDVDAAYM NKVELEAKVD ALMDEINFMK 300
  301 MFFDAELSQM QTHVSDTSVV LSMDNNRSLD LDSIIAEVKA QYEDIANRSR TEAESWYQTK 360
  361 YEELQQTAGR HGDDLRNTKH EISEMNRMIQ RLRSEIDNVK KQCANLQNAI AEAEQRGELA 420
  421 LKDARNKLTE LEEALQKAKQ DMARLLREYQ ELMNTKLALD VEIATYRKLL EGEECRLSGE 480
  481 GVGPVNISVV TNSLSSGYGG RSNIGYGSGL GSGIGGFASD IGPLLNRRGL GSGLSVGGSG 540
  541 FSASSGQGGG FSSGGGSSSS VKFVSTTSSS RRSFKS

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle