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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|13905252
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.84
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 GISCLFPASW HFSISPVGCP RILNTNLRQI VVISILAAAV SLLYFSVVII RSKYGWLSKD  60
   61 KKFQRYLARV TDVEATDTNN PSVNYGIVVD CGSSGSRIFV YCWPRHNGNP HDLLDIRQMR 120
  121 DKNRKPVVMK IKPGISEFAT SPEKVSDYIS PLLSFAAEHV PRAKHKETPL YILCTAGMRV 180
  181 LPESQQKAIL EDLLTDIPVH YDFLFSDSHA EVISGKQEGV YAWIGINFVL GRFEHIEEDD 240
  241 EAVVEVNIPG SESSEAIVRK RTAGVLDMGG VSTQIAYEVP QTEEVAKNLL AEFNLGCDVH 300
  301 QTEHVYRVYV ATFLGFGGNA ARQRYEDRLF ASTVQKNRLL GKQTGLTPDA PLLDPCLPLD 360
  361 IKDEIQQNGQ TLYLQGTGDF DLCRETLQPF MNKTNETQTS LNGVYQPPIH FQNSEFYGFS 420
  421 EFYYCTEDVL RMGGDYNAAR FTQAAKDYCA TKWSILRERF DRGLYASHAD LHRLKYQCFK 480
  481 SAWMFEVFHK GFSFPVTYKN LKTALQVYDK EVQWTLGAIL YRTRFLPLRD IRQEVFRAGH 540
  541 AHWRGVSFVY NHYLFSGCFL VVLLSILLYL LRLRRIHRRA PRTGSLWMEE GLPSQKGPGP 600
  601 L

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle