YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|49651086
Protein type:	Transmembrane
Type Confidence:	0.80
Topology Confidence:	0.64
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MLIVGLTGGI ATGKSTVSKL LKDKHDLTIV DADVIAREIL EPGQPAYKKV VEHFKGQVTD  60
   61 LFVPDSDKGQ GAAINRPALG RAVFGKENEK NRLFLNSVTH PAVRKAIVWQ VLSAWIWGNR 120
  121 LVVLDIPLLF ESKLDRYCGM TVVVSCSDPI QVERLMKRDG SDRADAEKRI ESQMSVQDKK 180
  181 KLADKVLSND GTLAELELQV DDLVKTITPG IIWTFLTWIP PIGLASALWT YVDRNYIRSK 240
  241 L

Type	Start	End	Confidence
Non-Cytoplasmic	1	210	0.74
Transmembrane Helix	211	232	0.76
Cytoplasmic	233	241	0.64