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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|50730661
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.64
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MLDNSTACPA VDNSTACPEN ATICSGTSCV LPEDDFNQTL SVVLSTVLTI MLALVMFSMG  60
   61 CNVEIKKFLH HIKRPWGIFV GFLCQFGIMP LTAFLLSLAF DVHPIQAVVV MIMGCCPGGT 120
  121 ASNIIAYWVD GDMDLSISMT TCSTLLAMGM MPLCLFVYTK MWTDSDAIVL PYDSIGISLV 180
  181 ALVVPVSVGV FVNHKWPSKA KRILKVGSIA GAILIVITAV VGGILYKGSW VITPKLWIIG 240
  241 TIFPAAGYSL GFFLARLAGL SWSRCRTVSL ETGMQNTQLC STIVQLSFSP EQLELMFTFP 300
  301 LIYSIFQLLF ALMILAGYRV YIKRCVKTNK DVEKREEKDD SKSISSHAKE NGGFIGLKAI 360
  361 KDESESLGHC CSHKRRVTGA ARAKAMTRLK ESQTARELSQ REIHYVAGEG ECALFTSCTK 420
  421 DHLCTILNKW KEDRLCIDHQ TQSMESAKER WVYRGPVTST FSSIPVLTKV TDKCDKSSYW 480
  481 HGVTEVSEVE SLLPPVPVIS VLVTVVLTEN ITPLSAYVHK KHTYTRRQSL SRGAHCQVYQ 540
  541 LGFELFQAAL SQTNPDVLAV PYLLVQLHQP NVMPILQVAG NVGASAAGIR LPNKRASHSL 600
  601 VWQRHLRSGA KLGSDRLLSY RIEKSPQPAY ISGLSWWRQQ ALRRLERNKR SDLESTASEL 660
  661 TPHSTQTPPP ENLVSLPSA

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle