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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|50731321
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.62
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MPRLATGEKR PLRTSFGPRH VMSPARPGDG RLYVHLHGPP EFPAFLFFFG AMTLQTQCSL  60
   61 PACLPPCLTR CPAAPRQAVL RATTEPMRLG LSPALRRGRG AHCTAAAEAS LAVEDSSRIG 120
  121 GVWCDSFGWC CKTACRILAL APNQRISHRA AQVPHSQCPL TVMAGENMDE TSVLPGHPQD 180
  181 SYQPAAHDDH ECCERVVINI AGLRFETQLK TLAQFPNTLL GNPKKRMRYF DPLRNEYFFD 240
  241 RNRPSFDAIL YYYQSGGRLR RPVNVPLDMF SEEIKFYELG EEAMEKFRED EGFIKDEERP 300
  301 LPEGEYQRQV WLLFEYPESS GPARVIAIVS VMVILISIVI FCLETLPELK EDKEYTVHRT 360
  361 DNTTQVYKSN IFTDPFFVVE TLCIIWFSFE LVVRFFACPS KTEFFKNIMN FIDIVAIIPY 420
  421 FITLGTEMAE REGTQKGEQA TSLAILRVIR LVRVFRIFKL SRHSKGLQIL GQTLKASMRE 480
  481 LGLLIFFLFI GVILFSSAVY FAEAEEPESH FTSIPDAFWW AVVSMTTVGY GDMYPVTIGG 540
  541 KIVGSLCAIA GVLTIALPVP VIVSNFNYFY HRETEGEEQA QLLHVSSPNL ASDSDLSRRS 600
  601 SSTISKSEYM EIEEDMNNSI DNFREANLRT GNCTVANQNC VNKSKLLTDV 

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle