YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|50737613
Protein type:	Globular with Signal Peptide
Type Confidence:	0.52
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MCGNNMSAPL PAIVPAARKA TAAVIFLHGL GDTGHGWSEA LAGIKSPHVK YICPHAPFMP  60
   61 VTLNMNMAMP SWFDIIGLSP DSQEDEVGIK QAAENVKALI DQEVKNGIPS NRIILGGFSQ 120
  121 GGALSLYTAL TTHQKLAGVV ALSCWLPLRT SFVQGAVGVN KEIPVLQCHG DCDPLVPLMF 180
  181 GSLTVEKLKS MINPANITFR TYSGMMHSSC IEEMMDIKQF IDKHLPPVD

Type	Start	End	Confidence
Signal Peptide	1	22	0.51
N-region	1	13
H-region	14	19
C-region	20	22
Cleavage Site	22	23
Non-Cytoplasmic	23	229	0.96