YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|50745551
Protein type:	Globular with Signal Peptide
Type Confidence:	0.99
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MALSSVSEVL LSLLSLQQAL TRAARSASSP AGPPLPSAML CSAVCSPRPQ HRDGEPLLLQ  60
   61 ALQPHSWDRC VAVCRTGPRA VCIPVDENPR KALQYVAARS SGCLCLYSDA GLSRNPGAPA 120
  121 PDDATGSGRL GEAEAMEPAK MASPKSAPKD AQVMAQILKD MGITEYEPRV INQMLEFAYR 180
  181 YVTTILEDAK IYSSHAKKSS VDADDVRLAI QCRTDQSFTS PPPRDFLLDI ARQKNQTPLP 240
  241 LIKPYSGPRL PPDRYCLTAP NYRLKSLQKK VTSSAGRITV PRLSVGAVSS RPSTPTLGTP 300
  301 SAQTVSVSTK VGTPVSLTGQ RFTVQIPSSQ ATVKTATPTT PTVQNVLINP SLIGPKNILI 360
  361 TTNMVSSQNA ANESNPLKRK HEDDDDYDNL

Type	Start	End	Confidence
Signal Peptide	1	23	0.99
N-region	1	14
H-region	15	20
C-region	21	23
Cleavage Site	23	24
Non-Cytoplasmic	24	390	0.99