YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|50746002
Protein type:	Globular with Signal Peptide
Type Confidence:	0.76
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MRCARLHLAP CGRASAVSAH DQHIALLVSA ILPRPCYEAQ NEAPRSATGR SPACRLCACA  60
   61 EAPRGLLGVV VPPGAVTLRA FCCHGAVRQA VKRAVLPAGA EGRAGTSCEG ARRPGSLPRA 120
  121 RRSTPGPGSR SPGAHRPRMF KKFDEKENVS NCIQLKTSVI KGIKNQLIDQ FPVIEPWLNQ 180
  181 IMPKKDPVKI VRCHEHIEIL TVNGELLFFR QREGIFYPTL RLLHKYPFIL PHQQVDKGAI 240
  241 KFVLSGANIM CPGLTSPGAK LYPAAVDTVV AIMAEGKQHA LCVGVMKMSA DDIEKVNKGI 300
  301 GIENIHYLND GLWHMKTYK

Type	Start	End	Confidence
Signal Peptide	1	19	0.74
N-region	1	10
H-region	11	16
C-region	17	19
Cleavage Site	19	20
Non-Cytoplasmic	20	319	0.99