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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|50750222
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.67
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MDLEHECERQ RVNHILETGY SQWETEQCIV LQIEATYLNY EENMNFSDKC LPLTLYVWCL  60
   61 CGLQLLEVDK VLETEMKVHM HTKFCIVCLL TFIFHQCNHC HKDGRDHGPE EGHEDHHNCY 120
  121 QISETPYHQT AGSESMPSKL STSEAENEQK YYIEKIFDRY GENGRLSFFG LEKLLMSLGL 180
  181 GEVKVVVINH DDIGHDHVSH LYALEVQEGR HFHSHSHPHS HSDSENQTMV GMAEKKNHKY 240
  241 NSERDAVVSS IKGDGKRIHD QSHHHHHHHP HPHHHLDHNS THHSRNDSVI HNEHGEQNHG 300
  301 PSTETNTTQD QRERKQRKQK KKRKKISETS GDTTQDCPPN HHLGDQCEHN RVHKHDHVHD 360
  361 ASHFHVHHRE HSGDRSANHG HQDSSLGSED GHHHTSKREA PCKHTGVRKH TISAHSRKDR 420
  421 NEDERDCEEC LNVTQLLRRY GLENSSPISP EFFIYMCPAL LYQIDRRLCI VHYDELEDFM 480
  481 KSKTASIENE DKTGASAPSV PQPSRGHVDC PTSDVQSVGE VDPYMCSWVC GIISITVISL 540
  541 LSLLGVILIP IINQWCFKFL LTFLVALAVG TMSGDALLHL LPHSHGGHNH SHHHGQGHIH 600
  601 EHKHSHRHAH GHGIENEGFL EENDPVLKGL VALGGIYVLF IIEHCIRMYK HYNKQKSKQK 660
  661 WCKNKQSEES PIGRKLSDQK LNNRPDADWL QLKPLAVGAD DSVLSEDRLN ETELTDLDGQ 720
  721 LESPPKNFLS VEEEGNMHHS HNDVLHAAQE HDLHDLEYDS HGEDKMIARK HSHLWHHKHS 780
  781 HHSHGHCHSG KDLKDTGIAN IAWMVIMGDG IHNFSDGLAI GAAFSAGLTG GISTSIAVFC 840
  841 HELPHELGDF AVLLKAGMTV KQAIVYNLLS AMMAYIGMLI GTAVGQYANN ITLWIFAVTA 900
  901 GMFLYVALVD MLPEMLHGDG DNEEHGYCPV GQFILQNLGL LLGFAIMLVI ALYEDKIVLN 960
  961 IQF

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle