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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|50755132
Protein type: Globular with Signal Peptide
Type Confidence: 0.99
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MPIAAAIRNA PSCRSPLCAV LLPSTAPLAA AFKEPYLPGG DTPGPIPRGR STGTAACRIQ  60
   61 SCSKNRPGAL LPPRSPTAPA GVFLESVKAT RRRLLKGIIF YYPIKLKLCM FCNTHTAFMG 120
  121 TSQPGGRSQC KIAPNNRTKE KDNQSYHQSL LDQSQCCEVP FDGNENSLVL AAAAQTADNC 180
  181 PYKITLKNDL TLYYTEQTKG DTKNRQRAAS LLTSRCVFTR PGSPEEELPH FPPTHLAGAL 240
  241 LGARRGFDSP PQPRRGSSPQ RPLQRPLRTR EAPQRPALPA APPPLGPQMA PDLVCWHGPR 300
  301 ARIRPHTPAA ADGAWRGLLA LPPAASPTAA RAAAAARRRG EGGGGGEGGG GGERSAVRQQ 360
  361 RAEMSGVLVI AAWCFLQVES RHPEIITGSS NHGNFLDNDK WLSTVSQYDK DKYWNKFRDE 420
  421 VEDDYVRNWN PNKPFDQALD PSKDPCLKVK CSPHKVCVTH DYETATCVSR KQLVHSIRQK 480
  481 KGNLAQKHWA GPANMVKCKP CPTVHASPVC GSDGHTYTTK CKLEFHACTS GKTITARCEG 540
  541 PCPCLPGPES PKHKTEKTAC TDKELRSLAS RLKDWFGALH EDANRVIKPT SSETAQGRFD 600
  601 TSILPICKDS LGWMFNKLDM NYDLLLDPSE ISAIYLDKYE PCVKPLFNSC DSFKDGKLSN 660
  661 NEWCYCFQKP GGLPCQNEMN RIQKLSRGKS LLGAFIPRCN EEGYYKATQC HGSTGQCWCV 720
  721 DKYGNEIAGS RKQGTVSCEE EQETSGDFGS GGSVVLLDDL EEEPEATKKD KEGKVKIHVR 780
  781 AANEDDEDED DDKDDEIGYI W

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle