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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|50757410
Protein type: Transmembrane
Type Confidence: 0.90
Topology Confidence: 0.70
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAFLMKKKKF KFQTSFTLEE LTAVPFVNGV LFCKIRLLDG GDFASLSTRE EVQENCVRWK  60
   61 KKFTFVCKMS ANPATGLLDP CICRVSVRKE LKGGKTYSKL GFADLNLAEF AGSGSTVRCC 120
  121 LLEGYDTKNT RQDNSILKVQ QLVTIGMSLL SGDPCFKTPP STAKSITIPG QDSTLQLTCK 180
  181 GEGTTSSNSS SATIGSLRQT KPRATILSSG VPEEPDQNLS SPEEVFHSGH SRNSSYASQQ 240
  241 SKISGKKEGV VCNHAAFAGY STEHSRSSSM SDLTHRRNTS TSSSASGGLS MTVECPEGER 300
  301 DHKLEKPPRP PRPALLLDRP SRRKKDSVES HPTRVDDTRI DADDIVEKIM QSQDFTDVSN 360
  361 TEDSNLRLFV SRDGTTTLSG IQLGNRKGKA DCFSSFLGLC QKAGPPLTLC SGPGLYVAFL 420
  421 ALPPLILNKK AALVIEPNAA QLGLEYPGWS RAKEEGAACF SLQTPPEAVA LPQASSTHTS 480
  481 PPHHRAENLG EKGTWVKPRA REHVVSVLCA DWWAAPGRTG QAEGLSVAVA MATATDRAVG 540
  541 FGLVAFSLIL FVYYTLWIIV LPFIDSDHSI HQYFLPREYA VIIPVVAGLL LLLFIGVFIM 600
  601 VVMWKSRKPA KKSD

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle