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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|50758583
Protein type: Transmembrane
Type Confidence: 0.92
Topology Confidence: 0.86
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKLPEKLPKP ELGSEGAKLS GSIYTDAAQT RKPQLPGDEQ PRCPPPRAAA TQKTREASVA  60
   61 PRVAVGGPPA SESGKGARSV RRGRHEETEP CYSRGAARDP GAAVSLSTAA RGSSGPRRSA 120
  121 SQPARPKGRC PAGLGGAASL PGGSSGRARA LFLSAFVFRR RTGCRSSPCP AAYSQEERAV 180
  181 WCGAAGRAPT PPVRPGWGGA GVAVLWGGSA VGWQCSGSAG FGETAVCVFG RPVRIGGQCE 240
  241 VRGSTENAPY PSGCAARAVG DAFGDCTASP VTSRALAPPA LGWLKTYGYL LPSDSQMSAA 300
  301 QSGKAVQSAV ATMQQFYGIP VTGVLDQTTL EVVSQCVEAA IRALPVGVGN GKEEGLCCGL 360
  361 LVLVGKVVFS GGTRGDVLKE QVEDDRYTSA EVEWMRWMKK PRCGVPDHPH LGHSRRKKRY 420
  421 ALTGQKWRQK HITYSVHNYT PKVGELDTRR AIRQAFDVWQ RVTPLTFEEV PYHEIKNDRK 480
  481 EADIMIFFAS GFHGDSSPFD GEGGFLAHAY FPGPGIGGDT HFDSDEPWTL GNSNHDGPVP 540
  541 ARVTGSAGGT AFSSFCRKCG GEGSELLGRK APVSHRQELR GFSLCFHHKD KWCFSEQLAG 600
  601 QQNKCLSCHL DMAYAQQGFW DSQRPSKLVG VRNDLFLVAV HELGHALGLE HSNDPSAIMA 660
  661 PFYQYMETHN FKLPQDDLQG IQKIYGEQQY PLVYLHRVQV HIKDCWTVKY SQLEQPVQME 720
  721 GKNRSSLMTV LYSIVMDVHL LKNKYQKREL GRSFCFKGAK QVSFCAREEA KCQWWKSHSE 780
  781 GPPIEPLEPT RPLPTLPVRR IHSTSERKHE RQPRPPSPPL GDRPSPPGTK PNICDGNFNT 840
  841 VALFRGEMFV FKDRWFWRLR NNRVQEGYPM QIEQFWKGLP AKIDAAYERS DGKFVFFKGD 900
  901 KYWVFKEVTA EPGYPHSLVE LGNCLPREGI DTALRWEPVG KTYFFKGDRY WRYNEDKRAT 960
  961 DPGYPKPITV WRGIPQAPQG AFISKEGFYT YFYKGKEYWK FDNQRLNVEP GYPRSILKDW1020
 1021 MGCNQKDVER SKDRRLPHDD VDIMVTINDV PSTVNAIAVV IPCILSLCIL VLVYTIFQFK1080
 1081 NKEVQQNVVY YKRPVQEWV

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle