YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|110739225, gi...
Protein type:	Globular with Signal Peptide
Type Confidence:	0.99
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKIHKLCFLA LLLAHTTSAV NLNLNLKTSE LVFLGDAELG PASDGVSRSG ALSMTRDENP  60
   61 FSHGQSLWST PVPFKPSSNS SSPYPFETSF TFSISTRIKP APGHGLAFVV VPSIESDGPG 120
  121 PAGYLGIFNK TNNGNPINHI FAVEFDVFQD KGFGDINDNH VGININSVTS VVAEKAGYWV 180
  181 QTGIGKMKHW SFKEFKLSNG ERYKAWIEYR NSKVTVTLAP ETVKKPKKPL IVAHLDLSKV 240
  241 FLQNMYPGFS GAMGRGVERH DIWSWTFQNS AKRI

Type	Start	End	Confidence
Signal Peptide	1	19	0.99
N-region	1	10
H-region	11	16
C-region	17	19
Cleavage Site	19	20
Non-Cytoplasmic	20	274	0.99