YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|21553655
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.81
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MIHLLYTVIF AEMALILLLL FKTPLRKLII LTFDRIKRGR GPVVVKTIGT TVFVVLLSSI  60
   61 YSLVNIQRRS EDGAVLNPTD QVLASKHLLE ASLMGFVLFL SLMIDRLHHY IRELRLLRKT 120
  121 METAKKQNRG FEDGKTTSGE EVKALGEEIA ALKAKIKTLE SESESKGKEL KGAQGETEAL 180
  181 RKQSDGFLME YDRLLEDNRN LRNQLESIGH SPEGKKGM

Type	Start	End	Confidence
Non-Cytoplasmic	1	4	0.91
Transmembrane Helix	5	25	0.87
Cytoplasmic	26	42	0.93
Transmembrane Helix	43	64	0.93
Non-Cytoplasmic	65	86	0.92
Transmembrane Helix	87	109	0.81
Cytoplasmic	110	218	0.93