YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|21593301
Protein type: Globular with Signal Peptide
Type Confidence: 0.74
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MELFALLIKV AGLLATVTVG ANVVSYSRFR RQNLAKFRSP IDESKEVLAD FNSIEHEEGK  60
   61 FFFGLATAPA HAEDDLDDAW LQFAKETPCS AEEAEAADKK ARRKKVKLAV GAITKGLAKN 120
  121 THGKEDKNAA DKPPSKNVAA WHNAPHAEDR LKFWSDPDKE VKLAKDTGVT VFRMGVDWSR 180
  181 IMPVEPTKGI KEAVNYEAVE HYKCILKKVR SNGMKVMLTL FHHSLPPWAA DYDGWKMEKT 240
  241 VDYFMDFTRI VVDSMYDLVD SWVTFNEPHI FTMLTYMCGS WPGNNPDFLE IATSTLPMGV 300
  301 FHRALHWMAV AHSKAYDYIH GKISLKKPLV GVAHHVSFMR PYGLFDIGAV TISNSLTIFP 360
  361 YIDSICEKLD FIGINYYGQE AVCGAGLKLV ETDEYSESGR GVYPDGLYRV LLMFHERYKH 420
  421 LKVPFIVTEN GVSDETDVIR RPYLIEHLLA LYAAMLKGVP VLGYIFWTIS DNWEWADGYG 480
  481 PKFGLVAVDR SHDLARTLRQ SYHLFSKIVK SGKVTRKDRS LAWNELQKAA KAGKLRPFYR 540
  541 GVDNHNLMYA DGLDKPQWRP FVDRDWRFGH YQMDGLQDPL SRVARTLLIW PLIMKKRIRK 600
  601 VKIKHTDDAG LVLHPALASP FD

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle