YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|18490564
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.60
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 AATAPKAGGS APEAAGSAEA PLQYSLLLQY LVGDKRQPRL LEPGSLGGIP SPAKSEEQKM  60
   61 IERAMESCAF KAVLACVGGF VLGGAFGIFT AGIDTNVGFD PKDPYRTPTA KEVLKDMGQR 120
  121 GMSYAKNFAI VGAMFSCTEC LVESYRGKSD WKNSVISGCI TGGAIGFRAG VKAGAIGCGG 180
  181 FAAFSAAIDY YLR

Type	Start	End	Confidence
Cytoplasmic	1	67	0.99
Transmembrane Helix	68	91	0.91
Non-Cytoplasmic	92	168	0.71
Transmembrane Helix	169	192	0.76
Cytoplasmic	193	193	0.60